ANR70100.1 protein (Selenomonas) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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co-expression

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gene fusions

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[Homology]

Score

ANR70100.1

TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (719 aa)

Predicted Functional Partners:

ANR71852.1

0.843

ANR70096.1

0.833

ANR69983.1

0.779

ANR70099.1

0.767

ANR70097.1

0.765

ANR70098.1

0.762

ANR71853.1

0.762

ANR69548.1

0.728

ANR70918.1

0.723

ANR71810.1

0.699

Your Current Organism:

Selenomonas

NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANR69548.1	ANR70096.1	AXF19_00020	AXF19_03225	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.571
ANR69548.1	ANR70100.1	AXF19_00020	AXF19_03250	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.728
ANR69548.1	ANR70918.1	AXF19_00020	AXF19_07955	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
ANR69983.1	ANR70100.1	AXF19_02550	AXF19_03250	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
ANR69983.1	ANR70918.1	AXF19_02550	AXF19_07955	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
ANR70096.1	ANR69548.1	AXF19_03225	AXF19_00020	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.571
ANR70096.1	ANR70097.1	AXF19_03225	AXF19_03230	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
ANR70096.1	ANR70098.1	AXF19_03225	AXF19_03235	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.898
ANR70096.1	ANR70099.1	AXF19_03225	AXF19_03240	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
ANR70096.1	ANR70100.1	AXF19_03225	AXF19_03250	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.833
ANR70096.1	ANR70918.1	AXF19_03225	AXF19_07955	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.559
ANR70096.1	ANR71810.1	AXF19_03225	AXF19_13130	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.605
ANR70096.1	ANR71852.1	AXF19_03225	AXF19_03220	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
ANR70096.1	ANR71853.1	AXF19_03225	AXF19_03245	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.896
ANR70097.1	ANR70096.1	AXF19_03230	AXF19_03225	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
ANR70097.1	ANR70098.1	AXF19_03230	AXF19_03235	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.916
ANR70097.1	ANR70099.1	AXF19_03230	AXF19_03240	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
ANR70097.1	ANR70100.1	AXF19_03230	AXF19_03250	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.765
ANR70097.1	ANR71852.1	AXF19_03230	AXF19_03220	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.520
ANR70097.1	ANR71853.1	AXF19_03230	AXF19_03245	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.920