flgK protein (Selenomonas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

flgK

Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)

Predicted Functional Partners:

ANR70487.1

0.999

ANR70492.1

0.998

ANR70493.1

0.997

ANR70484.1

0.996

ANR70666.1

0.995

ANR70770.1

0.993

ANR70769.1

0.990

ANR70800.1

0.990

AXF19_07290

0.989

ANR71880.1

0.987

Your Current Organism:

Selenomonas

NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANR70484.1	ANR70487.1	AXF19_05510	AXF19_05525	Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
ANR70484.1	ANR70492.1	AXF19_05510	AXF19_05550	Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar hook protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	0.950
ANR70484.1	ANR70493.1	AXF19_05510	AXF19_05555	Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar export chaperone FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
ANR70484.1	ANR70666.1	AXF19_05510	AXF19_06540	Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.841
ANR70484.1	ANR70769.1	AXF19_05510	AXF19_07105	Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.883
ANR70484.1	ANR70770.1	AXF19_05510	AXF19_07110	Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar motor switch phosphatase FliY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
ANR70484.1	ANR70800.1	AXF19_05510	AXF19_07275	Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.	0.891
ANR70484.1	ANR71880.1	AXF19_05510	AXF19_05505	Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar biosynthesis protein FlgM; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
ANR70484.1	AXF19_07290	AXF19_05510	AXF19_07290	Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar M-ring protein FliF; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.681
ANR70484.1	flgK	AXF19_05510	AXF19_05520	Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ANR70487.1	ANR70484.1	AXF19_05525	AXF19_05510	Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
ANR70487.1	ANR70492.1	AXF19_05525	AXF19_05550	Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar hook protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	0.995
ANR70487.1	ANR70493.1	AXF19_05525	AXF19_05555	Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar export chaperone FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
ANR70487.1	ANR70666.1	AXF19_05525	AXF19_06540	Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.823
ANR70487.1	ANR70769.1	AXF19_05525	AXF19_07105	Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.930
ANR70487.1	ANR70770.1	AXF19_05525	AXF19_07110	Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar motor switch phosphatase FliY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
ANR70487.1	ANR70800.1	AXF19_05525	AXF19_07275	Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.	0.906
ANR70487.1	ANR71880.1	AXF19_05525	AXF19_05505	Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar biosynthesis protein FlgM; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
ANR70487.1	AXF19_07290	AXF19_05525	AXF19_07290	Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar M-ring protein FliF; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
ANR70487.1	flgK	AXF19_05525	AXF19_05520	Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999