ANR70569.1 protein (Selenomonas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ANR70569.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)

Predicted Functional Partners:

metAA

0.761

ANR70568.1

0.708

ANR70567.1

0.700

ANR70571.1

0.440

ANR70566.1

0.437

Your Current Organism:

Selenomonas

NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANR70566.1	ANR70567.1	AXF19_05960	AXF19_05965	Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.476
ANR70566.1	ANR70568.1	AXF19_05960	AXF19_05970	Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily.	0.473
ANR70566.1	ANR70569.1	AXF19_05960	AXF19_05975	Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.437
ANR70567.1	ANR70566.1	AXF19_05965	AXF19_05960	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.476
ANR70567.1	ANR70568.1	AXF19_05965	AXF19_05970	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily.	0.790
ANR70567.1	ANR70569.1	AXF19_05965	AXF19_05975	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.700
ANR70567.1	metAA	AXF19_05965	AXF19_05980	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	0.551
ANR70568.1	ANR70566.1	AXF19_05970	AXF19_05960	Histidinol-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily.	Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.473
ANR70568.1	ANR70567.1	AXF19_05970	AXF19_05965	Histidinol-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily.	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.790
ANR70568.1	ANR70569.1	AXF19_05970	AXF19_05975	Histidinol-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
ANR70568.1	metAA	AXF19_05970	AXF19_05980	Histidinol-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily.	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	0.571
ANR70569.1	ANR70566.1	AXF19_05975	AXF19_05960	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.437
ANR70569.1	ANR70567.1	AXF19_05975	AXF19_05965	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.700
ANR70569.1	ANR70568.1	AXF19_05975	AXF19_05970	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily.	0.708
ANR70569.1	ANR70571.1	AXF19_05975	AXF19_05985	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.440
ANR70569.1	metAA	AXF19_05975	AXF19_05980	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	0.761
ANR70571.1	ANR70569.1	AXF19_05985	AXF19_05975	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.440
ANR70571.1	metAA	AXF19_05985	AXF19_05980	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	0.572
metAA	ANR70567.1	AXF19_05980	AXF19_05965	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
metAA	ANR70568.1	AXF19_05980	AXF19_05970	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	Histidinol-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily.	0.571