Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANR71886.1Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)    
Predicted Functional Partners:
ANR69807.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.525
ANR71871.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
ANR70248.1
Choline-sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
ANR69570.1
Filamentous hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
ANR70249.1
Choline-sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.509
ANR70858.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.486
ANR71884.1
Choline-sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
ANR70250.1
Choline-sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.466
ANR70306.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.466
ANR71865.1
Choline-sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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