Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ANR70660.1N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)    
Predicted Functional Partners:
ANR71890.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ANR71364.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.717
ANR70661.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
ddl
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
     
 0.491
ANR70229.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.469
ANR71401.1
Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
     
  0.462
ANR70514.1
Ethanolamine utilization protein EutJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.416
AXF19_06485
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.411
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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