Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AXF19_07290Flagellar M-ring protein FliF; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)    
Predicted Functional Partners:
ANR70769.1
Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ANR70770.1
Flagellar motor switch phosphatase FliY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ANR70804.1
Flagellar protein export ATPase FliI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
ANR70800.1
Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.
 
 
 0.997
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
 
 0.996
fliQ
EscS/YscS/HrcS family type III secretion system export apparatus protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.996
ANR70799.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.996
ANR70803.1
Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
fliE
Flagellar hook-basal body complex protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
flgK
Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.989
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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