Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AXF19_07580Galactose-1-phosphate uridylyltransferase; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)    
Predicted Functional Partners:
ANR69970.1
Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.938
ANR69589.1
protein-N(pi)-phosphohistidine--sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.914
ANR69744.1
PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.914
ANR69837.1
protein-N(pi)-phosphohistidine--sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.914
ANR70163.1
PTS glucose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.874
ANR70855.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.848
ANR71341.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.848
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 0.838
ANR71342.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.824
ANR71343.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.812
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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