Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANR70952.1Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0173 family. (225 aa)    
Predicted Functional Partners:
miaA
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.862
hfq
RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.
       0.844
ANR70447.1
PTS fructose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.722
ANR70950.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.686
ANR70951.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.686
ANR69899.1
PTS ascorbate transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.639
ANR69900.1
PTS ascorbate transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.611
ANR70955.1
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
       0.515
ANR71739.1
Phosphatidylserine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.470
ANR70956.1
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.431
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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