Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
ANR71116.1Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)    
Predicted Functional Partners:
ANR71117.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
ANR71950.1
Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.967
ANR71631.1
Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.963
ANR71115.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.943
ANR71118.1
Cobalamin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.924
ANR70935.1
Receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.727
ANR71751.1
Sodium pump decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.673
ANR70025.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.648
ANR70918.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.643
ANR69847.1
LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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