Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANR71134.1Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (313 aa)    
Predicted Functional Partners:
ANR71133.1
Rod shape-determining protein; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.964
ANR71135.1
Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.862
ANR71467.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.822
ANR70352.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.798
ANR70542.1
Rod shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.758
ANR71301.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.736
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
     0.720
ANR69571.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.640
AXF19_00620
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.640
ANR70671.1
Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.640
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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