Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANR71296.1Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)    
Predicted Functional Partners:
ANR71294.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.976
ANR71297.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.967
ANR71295.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S14 family.
 
    0.946
ANR71301.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.910
ANR71298.1
Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.886
ANR71292.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.825
ANR71277.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.822
ANR71280.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.796
ANR71233.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.795
ANR71238.1
Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.790
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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