Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
ANR71297.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)    
Predicted Functional Partners:
ANR71294.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.975
ANR71296.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.967
ANR71298.1
Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.960
ANR71295.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S14 family.
 
     0.873
ANR70359.1
6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family.
   
  0.819
ANR71301.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.808
ANR70352.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.794
ANR71467.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.794
ANR70133.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.774
ANR71299.1
Histone H1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.771
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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