Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ANR71589.1Fe-S cluster assembly ATPase SufC; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)    
Predicted Functional Partners:
ANR71587.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ANR71588.1
Fe-S cluster assembly protein SufB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
ANR71586.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.998
ANR71585.1
SUF system NifU family Fe-S cluster assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
ANR69786.1
Cysteine desulfurase DndA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.748
ANR70967.1
Cobalt chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.716
ANR71157.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.696
ANR70970.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.672
ANR69847.1
LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.627
ANR69926.1
Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.624
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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