Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANR71710.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (89 aa)    
Predicted Functional Partners:
ANR71711.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.776
ANR70133.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.674
ANR71294.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.674
ANR71709.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.664
ANR71946.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.513
ANR71712.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.452
ANR69657.1
Appr-1-p processing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.443
ANR70008.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.436
ANR69589.1
protein-N(pi)-phosphohistidine--sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.421
ANR69744.1
PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.421
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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