Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ANR71746.1GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)    
Predicted Functional Partners:
ANR69610.1
Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
ANR71747.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
ANR71748.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
ANR69825.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.936
ANR71745.1
FMN-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.932
ANR71749.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.929
ANR69612.1
Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.911
ANR70946.1
Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.808
ANR69613.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.758
AXF19_12785
Iron transporter; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.746
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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