Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANR71798.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)    
Predicted Functional Partners:
ANR70997.1
Dipeptide epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.617
ANR71799.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.542
ANR71800.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.477
ANR70523.1
Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.450
ANR71920.1
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.
       0.420
ANR71281.1
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.420
ANR71797.1
Zinc-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.413
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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