glnQ protein (Selenomonas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

glnQ

Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)

Predicted Functional Partners:

ANR71953.1

0.999

ANR69598.1

0.995

AXF19_13050

0.989

ANR69597.1

0.954

ANR70942.1

0.951

ANR69610.1

0.917

ANR70941.1

0.879

ANR71804.1

0.820

ANR70946.1

0.814

ANR70192.1

0.770

Your Current Organism:

Selenomonas

NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANR69597.1	ANR69598.1	AXF19_00340	AXF19_00345	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANR69597.1	ANR70192.1	AXF19_00340	AXF19_03765	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
ANR69597.1	ANR70941.1	AXF19_00340	AXF19_08080	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Thiol reductant ABC exporter subunit CydC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.596
ANR69597.1	ANR70942.1	AXF19_00340	AXF19_08085	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Thiol reductant ABC exporter subunit CydD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.596
ANR69597.1	ANR70946.1	AXF19_00340	AXF19_08105	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.873
ANR69597.1	ANR71953.1	AXF19_00340	AXF19_13100	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ANR69597.1	AXF19_13050	AXF19_00340	AXF19_13050	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	AAA family ATPase; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.732
ANR69597.1	glnQ	AXF19_00340	AXF19_13095	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
ANR69598.1	ANR69597.1	AXF19_00345	AXF19_00340	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.999
ANR69598.1	ANR70192.1	AXF19_00345	AXF19_03765	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
ANR69598.1	ANR70941.1	AXF19_00345	AXF19_08080	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiol reductant ABC exporter subunit CydC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
ANR69598.1	ANR70942.1	AXF19_00345	AXF19_08085	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiol reductant ABC exporter subunit CydD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
ANR69598.1	ANR70946.1	AXF19_00345	AXF19_08105	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
ANR69598.1	ANR71953.1	AXF19_00345	AXF19_13100	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
ANR69598.1	AXF19_13050	AXF19_00345	AXF19_13050	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	AAA family ATPase; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.997
ANR69598.1	glnQ	AXF19_00345	AXF19_13095	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
ANR69610.1	glnQ	AXF19_00405	AXF19_13095	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
ANR70192.1	ANR69597.1	AXF19_03765	AXF19_00340	Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.758
ANR70192.1	ANR69598.1	AXF19_03765	AXF19_00345	Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
ANR70192.1	ANR70941.1	AXF19_03765	AXF19_08080	Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiol reductant ABC exporter subunit CydC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.738