Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMD96711.1Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)    
Predicted Functional Partners:
AMD96710.1
Lipopolysaccharide cholinephosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.946
AMD96708.1
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.898
AMD96709.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.857
AMD97223.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.774
AXE83_06305
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
AMD97534.1
Peptidase M26; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.769
AMD97531.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
AMD97537.1
Virulence factor MviN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.744
AMD97796.1
Bifunctional metallophosphatase/5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.717
AMD97001.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.706
Your Current Organism:
Streptococcus
NCBI taxonomy Id: 712633
Other names: S. sp. oral taxon 431, Streptococcus sp. oral taxon 431
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