STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH40513.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (307 aa)    
Predicted Functional Partners:
AOH40514.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.762
AOH40500.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.749
mnmE
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 
 0.714
AOH40515.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.712
AOH41524.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.658
AOH41967.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.617
rsmG
16S rRNA (guanine(527)-N(7))-methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.601
AOH40516.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.438
AOH40264.1
DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.429
AOH40453.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.407
Your Current Organism:
Tannerella sp. HOT286
NCBI taxonomy Id: 712710
Other names: Bacteroides cf. forsythus oral clone BU063, T. sp. oral taxon HOT-286, Tannerella sp. BU063, Tannerella sp. oral taxon 286, Tannerella sp. oral taxon BU063, Tannerella sp. oral taxon HOT-286
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.