STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH40695.1Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology. (89 aa)    
Predicted Functional Partners:
AOH40696.1
Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.945
AOH39827.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.774
AOH40346.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.774
AOH41067.1
Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.771
AOH41017.1
Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.768
AOH41758.1
Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.766
AOH41358.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
AOH41911.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
AOH41904.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.447
AOH41762.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.444
Your Current Organism:
Tannerella sp. HOT286
NCBI taxonomy Id: 712710
Other names: Bacteroides cf. forsythus oral clone BU063, T. sp. oral taxon HOT-286, Tannerella sp. BU063, Tannerella sp. oral taxon 286, Tannerella sp. oral taxon BU063, Tannerella sp. oral taxon HOT-286
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.