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Pvag_1025 protein (Pantoea vagans) - STRING interaction network
"Pvag_1025" - annotation not available in Pantoea vagans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pvag_1025annotation not available (1209 aa)    
Predicted Functional Partners:
Pvag_1024
Putative type VI secretion system, core protein; Uncharacterized protein conserved in bacteria (412 aa)
 
   
  0.978
Pvag_1026
annotation not available (238 aa)
 
   
  0.967
Pvag_1023
Putative type VI secretion system, core protein; Uncharacterized protein conserved in bacteria (446 aa)
 
   
  0.966
Pvag_1027
Putative type VI secretion system, core protein; Uncharacterized protein conserved in bacteria (340 aa)
 
   
  0.964
Pvag_1022
annotation not available (165 aa)
 
   
  0.963
Pvag_1029
annotation not available (499 aa)
 
   
  0.927
Pvag_1028
annotation not available (177 aa)
 
     
  0.922
Pvag_1040
Putative type VI secretion system, core protein; Uncharacterized protein conserved in bacteria (623 aa)
 
   
  0.892
clpV
Putative type VI secretion system, core protein ATPase; ATPases with chaperone activity, ATP-binding subunit (869 aa)
 
   
  0.880
Pvag_1089
Putative type VI secretion system, core protein; Uncharacterized protein conserved in bacteria (405 aa)
 
   
  0.868
Your Current Organism:
Pantoea vagans
NCBI taxonomy Id: 712898
Other names: P. vagans C9-1, Pantoea vagans, Pantoea vagans C9-1, Pantoea vagans str. C9-1, Pantoea vagans strain C9-1
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