Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AME04035.1Glycosyl transferase family 39; Derived by automated computational analysis using gene prediction method: Protein Homology. (483 aa)    
Predicted Functional Partners:
AME04760.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.895
AME04033.1
Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.795
AME04034.1
Acylphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.766
AME03425.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.528
AME04029.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.508
AME04321.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.507
AME04037.1
Molecular chaperone Skp; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.496
AME03247.1
LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.478
AME02739.1
S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
  
    0.477
AME03424.1
Hopanoid biosynthesis associated protein HpnK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.472
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 713030
Other names: S. sp. oral taxon 136, Selenomonas sp. oral taxon 136
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