STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS46353.14-hydroxyphenylpyruvate dioxygenase. (376 aa)    
Predicted Functional Partners:
SIS46391.1
Homogentisate 1,2-dioxygenase.
 
 0.995
hisC
Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.907
SIS50658.1
Aspartate aminotransferase.
   
 
 0.906
SIS60044.1
Aspartate aminotransferase.
   
 
 0.906
SIS57836.1
Aspartate aminotransferase.
   
 
 0.906
SIS46336.1
Fumarylacetoacetate hydrolase.
 
  
 0.899
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
 0.792
SIS66114.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.717
SIS98241.1
Acetyl-CoA carboxylase, carboxyltransferase component.
  
 
 0.714
SIS46362.1
Hypothetical protein.
       0.605
Your Current Organism:
Chryseobacterium chaponense
NCBI taxonomy Id: 713588
Other names: C. chaponense, CCM 7737, Chryseobacterium chaponense Kampfer et al. 2011, DSM 23145
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