STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crgAPutative septation inhibitor protein; Involved in cell division; Belongs to the CrgA family. (88 aa)    
Predicted Functional Partners:
RAM_15050
COG3599 Cell division initiation protein.
  
   
 0.796
RAM_06240
COG1714 Predicted membrane protein/domain.
  
     0.715
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.694
RAM_00185
Hypothetical protein.
     
 0.687
RAM_41015
Hypothetical protein.
  
     0.657
RAM_00265
Peptidoglycan glycosyl transferase; COG0768 Cell division protein FtsI/penicillin-binding protein 2.
   
 
 0.653
FtsW-2
COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
     
 0.648
FtsI
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
   
 
 0.636
whiA
Putative sporulation transcription regulator whiA; Involved in cell division and chromosome segregation.
      
 0.627
SrtA
COG3764 Sortase (surface protein transpeptidase).
       0.617
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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