STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fprferredoxin--NADP+ reductase; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases. (439 aa)    
Predicted Functional Partners:
GltB
Glutamate synthase (NADPH/NADH) large chain; COG0067 Glutamate synthase domain 1.
  
 
 0.999
GltB-2
Glutamate synthase (NADPH/NADH) large chain; COG0067 Glutamate synthase domain 1.
  
 
 0.999
Fpr-2
ferredoxin--NADP+ reductase; COG1146 Ferredoxin.
 
0.954
AscD
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
  
 0.924
HcaC
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
     
 0.904
HcaC-2
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
     
 0.904
NirA
COG0155 Sulfite reductase, beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.861
CysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
  
  
 0.858
RAM_34155
COG1997 Ribosomal protein L37AE/L43A.
  
  
 0.842
RAM_17995
COG0069 Glutamate synthase domain 2; Belongs to the glutamate synthase family.
  
 
 0.708
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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