STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_00265Peptidoglycan glycosyl transferase; COG0768 Cell division protein FtsI/penicillin-binding protein 2. (489 aa)    
Predicted Functional Partners:
FtsW
COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 0.999
DacB
COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4).
     
 0.960
RAM_00280
FHA domain-containing protein; COG1716 FOG: FHA domain.
 
   
 0.950
FtsI
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
  
  
0.950
DacC
COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
 
 0.942
DacC-2
COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
 
 0.940
FtsW-2
COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 0.933
RAM_00255
COG0515 Serine/threonine protein kinase.
  
  
 0.901
RAM_00260
COG0515 Serine/threonine protein kinase.
  
  
 0.877
FtsQ
Cell division protein FtsQ; Essential cell division protein.
 
 
 0.873
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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