STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BglBCOG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase. (438 aa)    
Predicted Functional Partners:
RAM_26445
COG5297 Cellobiohydrolase A (1,4-beta-cellobiosidase A); Belongs to the glycosyl hydrolase family 6.
    
 0.904
RAM_00435
COG0477 Permeases of the major facilitator superfamily.
       0.773
BglB-3
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
  
 
0.740
MalZ-3
Alpha-glucosidase; COG0366 Glycosidases.
 
 
 0.734
MalZ-2
Alpha-glucosidase; COG0366 Glycosidases.
 
 
 0.730
MalZ-4
Alpha-glucosidase; COG0366 Glycosidases.
 
 
 0.729
RAM_41810
Endo-1,4-beta-glucanase; COG2730 Endoglucanase.
    
 0.697
RAM_18645
Hydrolase.
  
 
 0.691
RAM_26020
Rhamnosidase.
  
 
 0.691
RAM_29495
alpha-L-rhamnosidase; COG1049 Aconitase B.
  
 
 0.691
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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