Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ArgF | ArgH | RAM_30970 | RAM_24235 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG0165 Argininosuccinate lyase. | 0.910 |
| ArgF | Nos | RAM_30970 | RAM_21160 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Nitric-oxide synthase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily. | 0.900 |
| ArgF | RocF | RAM_30970 | RAM_08945 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family. | 0.920 |
| ArgF | arcA | RAM_30970 | RAM_00755 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG2235 Arginine deiminase. | 0.989 |
| ArgF | argG | RAM_30970 | RAM_22495 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.997 |
| ArgF | argH | RAM_30970 | RAM_30955 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG0165 Argininosuccinate lyase. | 0.981 |
| ArgH | ArgF | RAM_24235 | RAM_30970 | COG0165 Argininosuccinate lyase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.910 |
| ArgH | LdcC | RAM_24235 | RAM_21910 | COG0165 Argininosuccinate lyase. | COG1982 Arginine/lysine/ornithine decarboxylases. | 0.813 |
| ArgH | LdcC-2 | RAM_24235 | RAM_38290 | COG0165 Argininosuccinate lyase. | COG1982 Arginine/lysine/ornithine decarboxylases. | 0.813 |
| ArgH | Nos | RAM_24235 | RAM_21160 | COG0165 Argininosuccinate lyase. | Nitric-oxide synthase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily. | 0.912 |
| ArgH | RAM_32010 | RAM_24235 | RAM_32010 | COG0165 Argininosuccinate lyase. | Glycine amidinotransferase; COG1834 N-Dimethylarginine dimethylaminohydrolase. | 0.800 |
| ArgH | RocF | RAM_24235 | RAM_08945 | COG0165 Argininosuccinate lyase. | COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family. | 0.826 |
| ArgH | arcA | RAM_24235 | RAM_00755 | COG0165 Argininosuccinate lyase. | COG2235 Arginine deiminase. | 0.916 |
| ArgH | argG | RAM_24235 | RAM_22495 | COG0165 Argininosuccinate lyase. | COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.989 |
| ArgH | argH | RAM_24235 | RAM_30955 | COG0165 Argininosuccinate lyase. | COG0165 Argininosuccinate lyase. | 0.926 |
| LdcC | ArgH | RAM_21910 | RAM_24235 | COG1982 Arginine/lysine/ornithine decarboxylases. | COG0165 Argininosuccinate lyase. | 0.813 |
| LdcC | LdcC-2 | RAM_21910 | RAM_38290 | COG1982 Arginine/lysine/ornithine decarboxylases. | COG1982 Arginine/lysine/ornithine decarboxylases. | 0.913 |
| LdcC | Nos | RAM_21910 | RAM_21160 | COG1982 Arginine/lysine/ornithine decarboxylases. | Nitric-oxide synthase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily. | 0.900 |
| LdcC | RAM_32010 | RAM_21910 | RAM_32010 | COG1982 Arginine/lysine/ornithine decarboxylases. | Glycine amidinotransferase; COG1834 N-Dimethylarginine dimethylaminohydrolase. | 0.904 |
| LdcC | RocF | RAM_21910 | RAM_08945 | COG1982 Arginine/lysine/ornithine decarboxylases. | COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family. | 0.917 |
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