STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
Experiments
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[Homology]
Score
RAM_00925Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase; Belongs to the phosphoglycerate mutase family. (205 aa)    
Predicted Functional Partners:
PheA
COG0077 Prephenate dehydratase.
     
 0.867
RAM_00915
Phage tail assembly-like protein; COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1.
     
 0.591
htpX
COG0501 Zn-dependent protease with chaperone function; Belongs to the peptidase M48B family.
  
    0.563
RAM_45560
COG0501 Zn-dependent protease with chaperone function.
  
    0.563
CobI
COG2243 Precorrin-2 methylase; Belongs to the precorrin methyltransferase family.
  
  
 0.530
RAM_00930
Hypothetical protein.
       0.515
mscL
Large conductance mechanosensitive channel, MscL family protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
      
 0.432
Gpm-5
Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase.
  
   
 0.415
RAM_14595
COG1316 Transcriptional regulator.
 
     0.414
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
  
 0.407
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.