STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_01280Short-chain dehydrogenase/reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (270 aa)    
Predicted Functional Partners:
RAM_30615
Monooxygenase flavin-binding family protein; COG2072 Predicted flavoprotein involved in K+ transport.
 
  
 0.693
RAM_22875
Flavin binding monooxygenase; COG2072 Predicted flavoprotein involved in K+ transport.
 
  
 0.692
RAM_17170
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
    0.679
RAM_07280
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
    0.648
RAM_20485
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.633
RAM_35850
Cyclohexanone monooxygenase; COG2072 Predicted flavoprotein involved in K+ transport.
 
  
 0.628
RAM_46750
Flavin-binding monooxygenase-like protein; COG2072 Predicted flavoprotein involved in K+ transport.
 
  
 0.618
RAM_39510
Flavin-binding monooxygenase-like protein; COG2072 Predicted flavoprotein involved in K+ transport.
 
  
 0.607
RAM_07895
Putative monooxygenase; COG2072 Predicted flavoprotein involved in K+ transport.
 
  
 0.594
RAM_04875
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
    0.592
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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