Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| RAM_01315 | RAM_01435 | Hypothetical protein. | COG3584 Uncharacterized protein conserved in bacteria. | 0.777 |
| RAM_01315 | RAM_05610 | Hypothetical protein. | alpha-L-rhamnosidase. | 0.716 |
| RAM_01315 | RAM_06790 | Hypothetical protein. | Hypothetical protein. | 0.718 |
| RAM_01315 | RAM_06795 | Hypothetical protein. | Hypothetical protein. | 0.751 |
| RAM_01315 | RAM_17420 | Hypothetical protein. | Hypothetical protein; COG0480 Translation elongation factors (GTPases). | 0.695 |
| RAM_01315 | RAM_17980 | Hypothetical protein. | Hypothetical protein. | 0.690 |
| RAM_01315 | RAM_21605 | Hypothetical protein. | Hypothetical protein. | 0.738 |
| RAM_01315 | RAM_22935 | Hypothetical protein. | Activating enzyme of the ubiquitin-like protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2. | 0.659 |
| RAM_01315 | RAM_25805 | Hypothetical protein. | Beta-mannosidase; COG3250 Beta-galactosidase/beta-glucuronidase. | 0.665 |
| RAM_01315 | RAM_43830 | Hypothetical protein. | Pseudomonapepsin precursor; COG4934 Predicted protease. | 0.663 |
| RAM_01435 | RAM_01315 | COG3584 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.777 |
| RAM_01435 | RAM_05610 | COG3584 Uncharacterized protein conserved in bacteria. | alpha-L-rhamnosidase. | 0.509 |
| RAM_01435 | RAM_06790 | COG3584 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.492 |
| RAM_01435 | RAM_06795 | COG3584 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.636 |
| RAM_01435 | RAM_17420 | COG3584 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG0480 Translation elongation factors (GTPases). | 0.600 |
| RAM_01435 | RAM_17980 | COG3584 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.633 |
| RAM_01435 | RAM_21605 | COG3584 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.760 |
| RAM_01435 | RAM_22935 | COG3584 Uncharacterized protein conserved in bacteria. | Activating enzyme of the ubiquitin-like protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2. | 0.611 |
| RAM_01435 | RAM_43830 | COG3584 Uncharacterized protein conserved in bacteria. | Pseudomonapepsin precursor; COG4934 Predicted protease. | 0.403 |
| RAM_05610 | RAM_01315 | alpha-L-rhamnosidase. | Hypothetical protein. | 0.716 |
page 1 of 4