Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CopA | RAM_01745 | RAM_33480 | RAM_01745 | Copper-translocating P-type ATPase; COG2217 Cation transport ATPase. | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | 0.670 |
| CopA-2 | RAM_01745 | RAM_33530 | RAM_01745 | Copper-translocating P-type ATPase; COG2217 Cation transport ATPase. | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | 0.670 |
| CspA | RAM_01745 | RAM_01740 | RAM_01745 | COG1278 Cold shock proteins. | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | 0.598 |
| RAM_01745 | CopA | RAM_01745 | RAM_33480 | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | Copper-translocating P-type ATPase; COG2217 Cation transport ATPase. | 0.670 |
| RAM_01745 | CopA-2 | RAM_01745 | RAM_33530 | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | Copper-translocating P-type ATPase; COG2217 Cation transport ATPase. | 0.670 |
| RAM_01745 | CspA | RAM_01745 | RAM_01740 | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | COG1278 Cold shock proteins. | 0.598 |
| RAM_01745 | RAM_01750 | RAM_01745 | RAM_01750 | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.442 |
| RAM_01745 | RAM_01755 | RAM_01745 | RAM_01755 | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit. | 0.456 |
| RAM_01745 | RAM_17845 | RAM_01745 | RAM_17845 | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | Hypothetical protein. | 0.470 |
| RAM_01745 | RAM_17850 | RAM_01745 | RAM_17850 | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase. | 0.670 |
| RAM_01745 | RAM_17860 | RAM_01745 | RAM_17860 | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | Penicillinase repressor; COG3682 Predicted transcriptional regulator. | 0.473 |
| RAM_01745 | RAM_33325 | RAM_01745 | RAM_33325 | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | Penicillinase repressor; COG3682 Predicted transcriptional regulator. | 0.473 |
| RAM_01745 | RAM_35385 | RAM_01745 | RAM_35385 | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase. | 0.670 |
| RAM_01750 | RAM_01745 | RAM_01750 | RAM_01745 | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | 0.442 |
| RAM_01750 | RAM_01755 | RAM_01750 | RAM_01755 | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit. | 0.936 |
| RAM_01755 | RAM_01745 | RAM_01755 | RAM_01745 | COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit. | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | 0.456 |
| RAM_01755 | RAM_01750 | RAM_01755 | RAM_01750 | COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit. | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.936 |
| RAM_17845 | RAM_01745 | RAM_17845 | RAM_01745 | Hypothetical protein. | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | 0.470 |
| RAM_17845 | RAM_17850 | RAM_17845 | RAM_17850 | Hypothetical protein. | Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase. | 0.833 |
| RAM_17850 | RAM_01745 | RAM_17850 | RAM_01745 | Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase. | Cu(2+)-exporting ATPase; COG2608 Copper chaperone. | 0.670 |
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