Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RAM_02400 | rplR | RAM_02400 | RAM_03540 | Hypothetical protein. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.993 |
| RAM_02400 | rpmB | RAM_02400 | RAM_08890 | Hypothetical protein. | COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.993 |
| RAM_02400 | rpmE | RAM_02400 | RAM_40020 | Hypothetical protein. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.993 |
| RAM_02400 | rpmG-2 | RAM_02400 | RAM_03000 | Hypothetical protein. | COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.993 |
| RAM_02400 | rpmI | RAM_02400 | RAM_31045 | Hypothetical protein. | COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.993 |
| RAM_02400 | rpmJ-2 | RAM_02400 | RAM_03590 | Hypothetical protein. | COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.993 |
| RAM_02400 | rpsF | RAM_02400 | RAM_47670 | Hypothetical protein. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
| RAM_02400 | rpsG | RAM_02400 | RAM_03440 | Hypothetical protein. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.993 |
| RAM_02400 | rpsN | RAM_02400 | RAM_03525 | Hypothetical protein. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.993 |
| RAM_02400 | rpsR | RAM_02400 | RAM_47680 | Hypothetical protein. | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.973 |
| rplR | RAM_02400 | RAM_03540 | RAM_02400 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | Hypothetical protein. | 0.993 |
| rplR | rpmB | RAM_03540 | RAM_08890 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.999 |
| rplR | rpmE | RAM_03540 | RAM_40020 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.999 |
| rplR | rpmG-2 | RAM_03540 | RAM_03000 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.999 |
| rplR | rpmI | RAM_03540 | RAM_31045 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.999 |
| rplR | rpmJ-2 | RAM_03540 | RAM_03590 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.998 |
| rplR | rpsF | RAM_03540 | RAM_47670 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
| rplR | rpsG | RAM_03540 | RAM_03440 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.998 |
| rplR | rpsN | RAM_03540 | RAM_03525 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.995 |
| rplR | rpsR | RAM_03540 | RAM_47680 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.995 |
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