STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_03660COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family. (536 aa)    
Predicted Functional Partners:
RAM_03665
Integral membrane protein.
 
  
 0.834
RAM_03645
Hypothetical protein.
 
 
 0.815
AprE-2
COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
  
     0.729
RAM_08925
COG1404 Subtilisin-like serine proteases.
  
     0.701
FtsK
COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
 
 0.619
HscA
COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.528
RAM_37485
Rhs family protein; COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins.
  
 
 0.471
RAM_44670
Peptidase; COG0308 Aminopeptidase N.
 
 
 0.469
RAM_44755
Peptidase; COG0308 Aminopeptidase N.
 
 
 0.462
RAM_08365
COG0438 Glycosyltransferase.
  
     0.457
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.