Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NuoF-2 | nnrD | RAM_23310 | RAM_03760 | COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit. | Ribokinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NA [...] | 0.836 |
| RAM_03790 | nnrD | RAM_03790 | RAM_03760 | ATP/GTP-binding protein; COG0802 Predicted ATPase or kinase. | Ribokinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NA [...] | 0.900 |
| RAM_05195 | RAM_05630 | RAM_05195 | RAM_05630 | NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 0.493 |
| RAM_05195 | RAM_07850 | RAM_05195 | RAM_07850 | NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | COG0513 Superfamily II DNA and RNA helicases. | 0.493 |
| RAM_05195 | RAM_10450 | RAM_05195 | RAM_10450 | NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | COG0513 Superfamily II DNA and RNA helicases. | 0.493 |
| RAM_05195 | nnrD | RAM_05195 | RAM_03760 | NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | Ribokinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NA [...] | 0.834 |
| RAM_05630 | RAM_05195 | RAM_05630 | RAM_05195 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.493 |
| RAM_05630 | RAM_08770 | RAM_05630 | RAM_08770 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family. | 0.504 |
| RAM_05630 | RAM_21540 | RAM_05630 | RAM_21540 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Hypothetical protein; COG2319 FOG: WD40 repeat. | 0.493 |
| RAM_05630 | RAM_30835 | RAM_05630 | RAM_30835 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | ADP-ribose pyrophosphatase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.493 |
| RAM_05630 | RAM_39840 | RAM_05630 | RAM_39840 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.493 |
| RAM_05630 | nnrD | RAM_05630 | RAM_03760 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Ribokinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NA [...] | 0.893 |
| RAM_07850 | RAM_05195 | RAM_07850 | RAM_05195 | COG0513 Superfamily II DNA and RNA helicases. | NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.493 |
| RAM_07850 | RAM_08770 | RAM_07850 | RAM_08770 | COG0513 Superfamily II DNA and RNA helicases. | NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family. | 0.504 |
| RAM_07850 | RAM_21540 | RAM_07850 | RAM_21540 | COG0513 Superfamily II DNA and RNA helicases. | Hypothetical protein; COG2319 FOG: WD40 repeat. | 0.493 |
| RAM_07850 | RAM_30835 | RAM_07850 | RAM_30835 | COG0513 Superfamily II DNA and RNA helicases. | ADP-ribose pyrophosphatase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.493 |
| RAM_07850 | RAM_39840 | RAM_07850 | RAM_39840 | COG0513 Superfamily II DNA and RNA helicases. | NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.493 |
| RAM_07850 | nnrD | RAM_07850 | RAM_03760 | COG0513 Superfamily II DNA and RNA helicases. | Ribokinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NA [...] | 0.893 |
| RAM_08770 | RAM_05630 | RAM_08770 | RAM_05630 | NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family. | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 0.504 |
| RAM_08770 | RAM_07850 | RAM_08770 | RAM_07850 | NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family. | COG0513 Superfamily II DNA and RNA helicases. | 0.504 |
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