STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_03795Beta-lactamase-like protein; COG2367 Beta-lactamase class A. (320 aa)    
Predicted Functional Partners:
RAM_00625
Hypothetical protein.
  
     0.667
RAM_07630
Aminotransferase class V; COG0520 Selenocysteine lyase.
  
     0.654
RAM_01665
Hypothetical protein.
  
     0.636
RAM_03800
acetyl/propionyl-CoA carboxylase, carboxyltransferase subunit; COG0777 Acetyl-CoA carboxylase beta subunit.
 
     0.611
RAM_41660
Hypothetical protein.
  
     0.562
RAM_10090
PA14 domain-containing protein; COG3209 Rhs family protein.
  
    0.553
RAM_42180
Integral membrane protein.
  
     0.541
RAM_01615
Hypothetical protein.
  
     0.522
RAM_22450
Hypothetical protein.
 
     0.519
RAM_32875
Hypothetical protein.
 
     0.519
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.