STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_03800acetyl/propionyl-CoA carboxylase, carboxyltransferase subunit; COG0777 Acetyl-CoA carboxylase beta subunit. (442 aa)    
Predicted Functional Partners:
RAM_21220
COG0439 Biotin carboxylase.
  
 
 0.995
RAM_40715
Acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein; COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
 
 0.992
RAM_13395
UreA amidolyase; COG0439 Biotin carboxylase.
 
 
 0.986
RAM_25150
COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH).
 
  
 0.986
RAM_13390
UreA amidolyase; COG0439 Biotin carboxylase.
 
 
 0.984
RAM_04760
Acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein; COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
 
 
 0.983
RAM_14680
acyl-CoA carboxylase alpha chain; COG0439 Biotin carboxylase.
 
 
 0.983
FabD
COG0331 (acyl-carrier-protein) S-malonyltransferase.
 
  
 0.979
FabF-2
3-oxoacyl-[acyl-carrier-protein] synthase II; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.979
FabF-6
3-oxoacyl-[acyl-carrier-protein] synthase II; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.979
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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