STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_03965Mycothiol-dependent maleylpyruvate isomerase. (235 aa)    
Predicted Functional Partners:
RAM_03960
Cholesterol oxidase; COG2303 Choline dehydrogenase and related flavoproteins.
       0.771
RAM_03970
COG0277 FAD/FMN-containing dehydrogenases.
       0.568
RAM_29130
Cupin 2 domain-containing protein; COG3435 Gentisate 1,2-dioxygenase.
     
 0.512
RAM_03955
Transcriptional regulator.
       0.511
RAM_31560
Hypothetical protein.
  
     0.461
RAM_01825
Hypothetical protein.
  
     0.452
RAM_31190
Beta-lactamase class B; COG0491 Zn-dependent hydrolases, including glyoxylases.
 
     0.414
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.