Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AmiA | AmiA-2 | RAM_45725 | RAM_47970 | COG0860 N-acetylmuramoyl-L-alanine amidase. | N-acetylmuramoyl-L-alanine amidase; COG3409 Putative peptidoglycan-binding domain-containing protein. | 0.957 |
| AmiA | RAM_03985 | RAM_45725 | RAM_03985 | COG0860 N-acetylmuramoyl-L-alanine amidase. | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.441 |
| AmiA-2 | AmiA | RAM_47970 | RAM_45725 | N-acetylmuramoyl-L-alanine amidase; COG3409 Putative peptidoglycan-binding domain-containing protein. | COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.957 |
| AmiA-2 | RAM_03985 | RAM_47970 | RAM_03985 | N-acetylmuramoyl-L-alanine amidase; COG3409 Putative peptidoglycan-binding domain-containing protein. | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.445 |
| RAM_03975 | RAM_03980 | RAM_03975 | RAM_03980 | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases. | 0.671 |
| RAM_03975 | RAM_03985 | RAM_03975 | RAM_03985 | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.457 |
| RAM_03980 | RAM_03975 | RAM_03980 | RAM_03975 | COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases. | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | 0.671 |
| RAM_03980 | RAM_03985 | RAM_03980 | RAM_03985 | COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases. | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.550 |
| RAM_03985 | AmiA | RAM_03985 | RAM_45725 | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.441 |
| RAM_03985 | AmiA-2 | RAM_03985 | RAM_47970 | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | N-acetylmuramoyl-L-alanine amidase; COG3409 Putative peptidoglycan-binding domain-containing protein. | 0.445 |
| RAM_03985 | RAM_03975 | RAM_03985 | RAM_03975 | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | 0.457 |
| RAM_03985 | RAM_03980 | RAM_03985 | RAM_03980 | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases. | 0.550 |
| RAM_03985 | RAM_42690 | RAM_03985 | RAM_42690 | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | COG0212 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.439 |
| RAM_03985 | tatA | RAM_03985 | RAM_24850 | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.468 |
| RAM_03985 | tatB | RAM_03985 | RAM_05440 | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | Sec-independent translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.468 |
| RAM_42690 | RAM_03985 | RAM_42690 | RAM_03985 | COG0212 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.439 |
| tatA | RAM_03985 | RAM_24850 | RAM_03985 | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.468 |
| tatA | tatB | RAM_24850 | RAM_05440 | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Sec-independent translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.855 |
| tatB | RAM_03985 | RAM_05440 | RAM_03985 | Sec-independent translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.468 |
| tatB | tatA | RAM_05440 | RAM_24850 | Sec-independent translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.855 |