STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaE2Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. (1103 aa)    
Predicted Functional Partners:
RAM_04155
DNA polymerase; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair.
 
  
 0.969
RAM_38295
DNA polymerase; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair.
 
  
 0.871
RAM_04150
Hypothetical protein.
 
  
 0.865
RAM_36550
Hypothetical protein.
 
  
 0.865
RAM_38300
Hypothetical protein.
 
  
 0.865
HolA
Hypothetical protein; COG1466 DNA polymerase III, delta subunit.
  
 
 0.782
RAM_04160
Hypothetical protein.
       0.773
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.764
dnaX
DNA polymerase III subunits gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
 
 0.750
DnaQ
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
  
 
 0.741
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.