STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AprECOG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family. (459 aa)    
Predicted Functional Partners:
RAM_04320
Integral membrane protein.
 
   
 0.644
RAM_03645
Hypothetical protein.
  
 
 0.607
RAM_02620
Metallopeptidase; COG0308 Aminopeptidase N.
 
 
 0.558
RAM_11340
Peptidase S8 and S53, subtilisin, kexin, sedolisin; COG1404 Subtilisin-like serine proteases.
  
     0.506
RAM_07165
Metallopeptidase; COG0308 Aminopeptidase N.
 
 
 0.493
RAM_45890
Cell division FtsK/SpoIIIE; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
 
 0.484
RAM_44670
Peptidase; COG0308 Aminopeptidase N.
 
 
 0.483
RAM_37485
Rhs family protein; COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins.
  
 
 0.471
Ggt-2
COG0405 Gamma-glutamyltransferase.
  
  
 0.466
RAM_44755
Peptidase; COG0308 Aminopeptidase N.
 
 
 0.440
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.