STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AddCOG1816 Adenosine deaminase. (346 aa)    
Predicted Functional Partners:
PunA
COG0005 Purine nucleoside phosphorylase.
 
 
 0.940
RAM_11155
COG0524 Sugar kinases, ribokinase family.
    
 0.940
Add-2
COG1816 Adenosine deaminase.
  
  
0.925
Add-3
COG1816 Adenosine deaminase.
  
  
 0.917
RAM_47130
COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.
    
 0.909
surE
5'(3')-nucleotidase/polyphosphatase; COG0496 Predicted acid phosphatase.
    
 0.904
SurE
Stationary phase survival protein SurE; COG0496 Predicted acid phosphatase.
    
 0.904
NagD
NagD protein; COG0647 Predicted sugar phosphatases of the HAD superfamily; Belongs to the HAD-like hydrolase superfamily.
     
 0.903
YfiH
Multi-copper oxidoreductase; Belongs to the multicopper oxidase YfiH/RL5 family.
    
 0.902
Cdd
COG0295 Cytidine deaminase.
 
   
 0.741
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.