STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_06295APH/ChoK family kinase; COG0661 Predicted unusual protein kinase. (446 aa)    
Predicted Functional Partners:
RAM_02190
COG1396 Predicted transcriptional regulators.
  
     0.730
RAM_12450
Cyclase/dehydrase.
  
 
 
 0.730
RAM_06300
Hypothetical protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
  
    0.636
RAM_45410
COG0003 Oxyanion-translocating ATPase.
  
     0.594
RAM_02410
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.586
RAM_45415
COG0003 Oxyanion-translocating ATPase.
  
     0.562
RAM_02335
Hypothetical protein.
  
     0.559
RAM_06290
Hypothetical protein.
       0.490
RAM_06305
COG1451 Predicted metal-dependent hydrolase.
       0.446
RAM_03785
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
  
 0.432
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.