| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DnaK-2 | GyrA | RAM_32940 | RAM_06580 | Molecular chaperone DnaK; COG4249 Uncharacterized protein containing caspase domain; Belongs to the heat shock protein 70 family. | COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | 0.483 |
| DnaK-2 | GyrB | RAM_32940 | RAM_06585 | Molecular chaperone DnaK; COG4249 Uncharacterized protein containing caspase domain; Belongs to the heat shock protein 70 family. | DNA gyrase subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit. | 0.648 |
| DnaK-2 | dnaK | RAM_32940 | RAM_47010 | Molecular chaperone DnaK; COG4249 Uncharacterized protein containing caspase domain; Belongs to the heat shock protein 70 family. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.930 |
| DnaK-2 | gyrA | RAM_32940 | RAM_00035 | Molecular chaperone DnaK; COG4249 Uncharacterized protein containing caspase domain; Belongs to the heat shock protein 70 family. | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.602 |
| DnaK-2 | recA | RAM_32940 | RAM_11920 | Molecular chaperone DnaK; COG4249 Uncharacterized protein containing caspase domain; Belongs to the heat shock protein 70 family. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.480 |
| DnaK-2 | rpoB | RAM_32940 | RAM_03350 | Molecular chaperone DnaK; COG4249 Uncharacterized protein containing caspase domain; Belongs to the heat shock protein 70 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.608 |
| GyrA | DnaK-2 | RAM_06580 | RAM_32940 | COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | Molecular chaperone DnaK; COG4249 Uncharacterized protein containing caspase domain; Belongs to the heat shock protein 70 family. | 0.483 |
| GyrA | GyrB | RAM_06580 | RAM_06585 | COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | DNA gyrase subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit. | 0.995 |
| GyrA | dnaK | RAM_06580 | RAM_47010 | COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.613 |
| GyrA | gyrA | RAM_06580 | RAM_00035 | COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.599 |
| GyrA | recA | RAM_06580 | RAM_11920 | COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.654 |
| GyrA | rpoB | RAM_06580 | RAM_03350 | COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.674 |
| GyrA | secA | RAM_06580 | RAM_06170 | COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.774 |
| GyrB | DnaK-2 | RAM_06585 | RAM_32940 | DNA gyrase subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit. | Molecular chaperone DnaK; COG4249 Uncharacterized protein containing caspase domain; Belongs to the heat shock protein 70 family. | 0.648 |
| GyrB | GyrA | RAM_06585 | RAM_06580 | DNA gyrase subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit. | COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | 0.995 |
| GyrB | RAM_06255 | RAM_06585 | RAM_06255 | DNA gyrase subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit. | COG0210 Superfamily I DNA and RNA helicases. | 0.825 |
| GyrB | TopA | RAM_06585 | RAM_21850 | DNA gyrase subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit. | COG3569 Topoisomerase IB. | 0.720 |
| GyrB | dnaK | RAM_06585 | RAM_47010 | DNA gyrase subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.735 |
| GyrB | gyrA | RAM_06585 | RAM_00035 | DNA gyrase subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit. | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.986 |
| GyrB | recA | RAM_06585 | RAM_11920 | DNA gyrase subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.747 |