STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RAM_06600FMN reductase; COG0431 Predicted flavoprotein. (195 aa)    
Predicted Functional Partners:
RAM_06595
Monooxygenase; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
 0.980
SsuD-7
Alkanesulfonate monooxygenase; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
 0.934
CysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
   
 
 0.917
NirA
COG0155 Sulfite reductase, beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 
 0.907
TauD-3
COG2175 Probable taurine catabolism dioxygenase.
  
 
  0.907
RAM_36220
cob(II)yrinic acid a,c-diamide reductase; COG0778 Nitroreductase.
    
 0.904
RAM_12785
Riboflavin kinase/FAD synthetase; COG0196 FAD synthase.
    
 0.903
RAM_32420
Riboflavin kinase; COG0196 FAD synthase; Belongs to the ribF family.
    
 0.903
SseA
Rhodanese-like protein; COG2897 Rhodanese-related sulfurtransferase.
     
  0.900
RAM_45520
FMN reductase; COG0431 Predicted flavoprotein.
     
  0.900
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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