Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| RAM_03345 | RAM_06780 | LuxR family transcriptional regulator; COG2771 DNA-binding HTH domain-containing proteins. | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | 0.491 |
| RAM_03345 | RAM_17355 | LuxR family transcriptional regulator; COG2771 DNA-binding HTH domain-containing proteins. | Ricin-type beta-trefoil lectin domain-containing protein. | 0.521 |
| RAM_06775 | RAM_06780 | Hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | 0.543 |
| RAM_06780 | RAM_03345 | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | LuxR family transcriptional regulator; COG2771 DNA-binding HTH domain-containing proteins. | 0.491 |
| RAM_06780 | RAM_06775 | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | Hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 0.543 |
| RAM_06780 | RAM_07545 | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | Hypothetical protein. | 0.445 |
| RAM_06780 | RAM_17355 | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | Ricin-type beta-trefoil lectin domain-containing protein. | 0.624 |
| RAM_06780 | RAM_20040 | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | Hypothetical protein; COG3664 Beta-xylosidase. | 0.530 |
| RAM_06780 | RAM_20915 | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | Hypothetical protein. | 0.494 |
| RAM_06780 | RAM_22055 | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | Hypothetical protein. | 0.457 |
| RAM_06780 | RAM_22935 | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | Activating enzyme of the ubiquitin-like protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2. | 0.414 |
| RAM_06780 | RAM_24155 | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | Lanthionine synthetase; COG4403 Lantibiotic modifying enzyme. | 0.521 |
| RAM_06780 | RAM_32970 | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | Hypothetical protein. | 0.427 |
| RAM_07545 | RAM_06780 | Hypothetical protein. | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | 0.445 |
| RAM_07545 | RAM_20040 | Hypothetical protein. | Hypothetical protein; COG3664 Beta-xylosidase. | 0.539 |
| RAM_07545 | RAM_20915 | Hypothetical protein. | Hypothetical protein. | 0.473 |
| RAM_07545 | RAM_22055 | Hypothetical protein. | Hypothetical protein. | 0.506 |
| RAM_07545 | RAM_22935 | Hypothetical protein. | Activating enzyme of the ubiquitin-like protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2. | 0.442 |
| RAM_17355 | RAM_03345 | Ricin-type beta-trefoil lectin domain-containing protein. | LuxR family transcriptional regulator; COG2771 DNA-binding HTH domain-containing proteins. | 0.521 |
| RAM_17355 | RAM_06780 | Ricin-type beta-trefoil lectin domain-containing protein. | Oxidoreductase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. | 0.624 |
page 1 of 3