STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ManX-2Mannose/sorbose-specific IIA subunit of PTS system; COG2893 Phosphotransferase system, mannose/fructose-specific component IIA. (129 aa)    
Predicted Functional Partners:
ManZ
Mannose/fructose-specific IIC/D component of PTS system; COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC.
 
 0.999
ManX
Mannose-specific IIB subunit of PTS system; COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB.
 
  
 0.991
RAM_13850
Phosphocarrier protein.
  
 0.952
RAM_22905
COG1925 Phosphotransferase system, HPr-related proteins.
  
 0.952
ManA
COG1482 Phosphomannose isomerase.
    
 0.919
ManA-2
COG1482 Phosphomannose isomerase.
    
 0.919
RAM_04620
COG1109 Phosphomannomutase.
    
 0.907
manB
Phosphomannomutase/phosphoglucomutase; COG1109 Phosphomannomutase.
    
 0.907
RAM_38105
Beta-mannosidase; COG2755 Lysophospholipase L1 and related esterases.
     
  0.900
RAM_06955
Hypothetical protein; COG1064 Zn-dependent alcohol dehydrogenases.
 
   
 0.849
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.