STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_07335Hypothetical protein; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). (305 aa)    
Predicted Functional Partners:
RAM_30250
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.685
RAM_42830
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.655
RAM_38430
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.635
RAM_23595
Oxidoreductase; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.601
RAM_38245
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.592
RAM_46730
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.580
RAM_07330
COG1309 Transcriptional regulator.
 
     0.572
RAM_11130
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.550
RAM_34775
Oxidoreductase; COG0656 Aldo/keto reductases, related to diketogulonate reductase.
 
 
 0.523
RAM_29470
COG0656 Aldo/keto reductases, related to diketogulonate reductase.
 
 
 0.520
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.