STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PaaZBifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. (675 aa)    
Predicted Functional Partners:
PaaB
Phenylacetic acid degradation protein PaaB; COG3460 Uncharacterized enzyme of phenylacetate metabolism.
 
  
 0.978
PaaD
Phenylacetic acid degradation protein PaaD; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
  
 0.978
paaA
phenylacetate-CoA oxygenase subunit PaaA.
 
  
 0.973
PaaE
Phenylacetic acid degradation oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
  
 0.972
PaaC
Phenylacetic acid degradation protein PaaC.
 
  
 0.971
PaaG-2
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.955
PaaG-8
COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.947
PaaG-35
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.947
PaaI
COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
  
 0.911
PaaK
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.846
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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