STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_08375COG0386 Glutathione peroxidase; Belongs to the glutathione peroxidase family. (162 aa)    
Predicted Functional Partners:
Ggt
Gamma-glutamyltransferase; COG0346 Lactoylglutathione lyase and related lyases.
  
 
 0.932
Ggt-2
COG0405 Gamma-glutamyltransferase.
    
 0.915
RAM_28180
COG0405 Gamma-glutamyltransferase.
    
 0.915
gshB
COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the prokaryotic GSH synthase family.
    
 0.915
RAM_08385
Methyltransferase; COG0500 SAM-dependent methyltransferases.
  
    0.780
RAM_08380
Hypothetical protein; Belongs to the glycosyl hydrolase 57 family.
       0.772
RAM_45370
COG0695 Glutaredoxin and related proteins.
  
 
 0.606
RAM_08390
Hypothetical protein.
       0.563
TrxB-2
COG0492 Thioredoxin reductase.
  
  
 0.556
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.512
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.